Gene detail information of Glyur000004s00000390.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07500.1 | 6.00E-34 | Far-red impaired responsive (FAR1) family protein |
| NR | XP_004486917.1 | 7.49E-165 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9SZL8|FRS5_ARATH | 1.00E-22 | Protein FAR1-RELATED SEQUENCE 5 |
| trEMBL | tr|G7IHU5|G7IHU5_MEDTR | 3.00E-162 | FAR-RED impaired response-like protein {ECO:0000313|EMBL:AES67767.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 110669 | 112517 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000004s00000390.1 | PF03101.10 | FAR1 | 75 | 165 | 4.70E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.299 |
| SRR1783600 | control | 4.179 |
| SRR1783602 | moderate drought stress | 3.291 |
| SRR1811619 | moderate drought stress | 3.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.360 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.139 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.895 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.552 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.953 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.038 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.363 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 9.411 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.113 |
| SRR2967015 | Control (Tissue:root) | 10.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.565 |
| SRR9715740 | Leave | 10.411 |
| SRR9715741 | Leave | 5.939 |
| SRR9715739 | Root | 0.953 |
| SRR9715742 | Root | 3.655 |
| SRR9715743 | Root | 2.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.335 |
| SRR8749028 | MeJA induced 9h | 5.057 |
| SRR8749029 | MeJA induced 9h | 3.503 |
| SRR8749030 | Uninduced | 1.450 |
| SRR8749031 | Uninduced | 0.311 |
| SRR8749032 | Uninduced | 0.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.248 |
| SRR8400027 | Control-Root | 9.264 |