Gene detail information of Glyur000004s00000418.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12890.1 | 4.00E-143 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003597473.1 | 0 | Anthocyanidin 3-O-glucosyltransferase [Medicago truncatula] |
| Swissprot | tr|Q9LXV0|U92A1_ARATH | 6.00E-179 | UDP-glycosyltransferase 92A1 |
| trEMBL | tr|G7IUF9|G7IUF9_MEDTR | 0 | UDP-glucosyltransferase family protein {ECO:0000313|EMBL:AES67724.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 261996 | 263408 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000004s00000418.1 | PF00201.13 | UDPGT | 253 | 423 | 4.20E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.108 |
| SRR1783600 | control | 5.361 |
| SRR1783602 | moderate drought stress | 7.960 |
| SRR1811619 | moderate drought stress | 8.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.902 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.358 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.478 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.243 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.086 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.062 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.702 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.007 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.683 |
| SRR2967015 | Control (Tissue:root) | 17.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 17.030 |
| SRR9715740 | Leave | 12.413 |
| SRR9715741 | Leave | 16.967 |
| SRR9715739 | Root | 54.879 |
| SRR9715742 | Root | 42.213 |
| SRR9715743 | Root | 39.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.756 |
| SRR8749028 | MeJA induced 9h | 47.650 |
| SRR8749029 | MeJA induced 9h | 26.306 |
| SRR8749030 | Uninduced | 38.037 |
| SRR8749031 | Uninduced | 10.644 |
| SRR8749032 | Uninduced | 15.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.585 |
| SRR8400027 | Control-Root | 21.801 |