Gene detail information of Glyur000004s00000433.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G51170.19.00E-109Protein kinase superfamily protein
NRXP_004486949.10PREDICTED: serine/threonine-protein kinase OXI1-like [Cicer arietinum]
COGYP_828587.11.00E-19serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|Q9LT38|UNCL_ARATH1.00E-154Serine/threonine-protein kinase UCNL {ECO:0000305}
trEMBLtr|I1LQH9|I1LQH9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05990.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00004347250348515-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000004s00000433.1PF00069.20Pkinase411883.20E-34
Glyur000004s00000433.1PF00069.20Pkinase2473512.00E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.113
SRR1783600control25.206
SRR1783602moderate drought stress19.903
SRR1811619moderate drought stress19.772

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.878
DRR006520Root Summer glycyrrhizin high producing strain26.983
DRR006521Root Winter glycyrrhizin high producing strain11.174
DRR006522Root Winter glycyrrhizin high producing strain10.991
DRR006523Root Summer glycyrrhizin low producing strain15.370
DRR006524Root Summer glycyrrhizin low producing strain16.197
DRR006525Leaf Summer glycyrrhizin high producing strain5.948
DRR006526Leaf Summer glycyrrhizin high producing strain6.092

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.709
SRR2868004Drought Stress(Tissue:root)57.081
SRR2967015Control (Tissue:root)37.507

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.197
SRR9715740Leave4.192
SRR9715741Leave6.441
SRR9715739Root15.918
SRR9715742Root15.684
SRR9715743Root14.734

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.434
SRR8749028MeJA induced 9h2.072
SRR8749029MeJA induced 9h3.234
SRR8749030Uninduced0.257
SRR8749031Uninduced0.917
SRR8749032Uninduced0.946

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.915
SRR8400027Control-Root27.226

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved