Gene detail information of Glyur000004s00000445.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21200.1 | 2.00E-77 | sequence-specific DNA binding transcription factors |
| NR | XP_004486956.1 | 0 | PREDICTED: uncharacterized protein LOC101493778 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7BWQ6|V7BWQ6_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW22374.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 402956 | 404329 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000004s00000445.1 | PF13837.1 | Myb_DNA-bind_4 | 121 | 247 | 4.30E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.991 |
| SRR1783600 | control | 11.628 |
| SRR1783602 | moderate drought stress | 16.288 |
| SRR1811619 | moderate drought stress | 16.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.016 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.316 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.007 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.359 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.484 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.653 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.935 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 33.308 |
| SRR2868004 | Drought Stress(Tissue:root) | 41.494 |
| SRR2967015 | Control (Tissue:root) | 43.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 19.669 |
| SRR9715740 | Leave | 25.803 |
| SRR9715741 | Leave | 25.466 |
| SRR9715739 | Root | 6.259 |
| SRR9715742 | Root | 30.317 |
| SRR9715743 | Root | 22.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.364 |
| SRR8749028 | MeJA induced 9h | 43.692 |
| SRR8749029 | MeJA induced 9h | 27.126 |
| SRR8749030 | Uninduced | 20.989 |
| SRR8749031 | Uninduced | 13.374 |
| SRR8749032 | Uninduced | 10.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 46.057 |
| SRR8400027 | Control-Root | 48.055 |