Gene detail information of Glyur000004s00000497.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G28930.32.00E-169protein kinase 1B
NRBAE71262.10putative protein kinase APK1A [Trifolium pratense]
COGYP_001958461.12.00E-26hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|P46573|APK1B_ARATH0Protein kinase APK1B, chloroplastic (Precursor)
trEMBLtr|Q2PEU0|Q2PEU0_TRIPR0Putative uncharacterized protein {ECO:0000313|EMBL:BAE71262.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00004713241716944-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000004s00000497.1PF07714.12Pkinase_Tyr723502.40E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.567
SRR1783600control9.506
SRR1783602moderate drought stress14.521
SRR1811619moderate drought stress14.311

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.587
DRR006520Root Summer glycyrrhizin high producing strain15.553
DRR006521Root Winter glycyrrhizin high producing strain8.471
DRR006522Root Winter glycyrrhizin high producing strain8.338
DRR006523Root Summer glycyrrhizin low producing strain34.976
DRR006524Root Summer glycyrrhizin low producing strain35.688
DRR006525Leaf Summer glycyrrhizin high producing strain9.536
DRR006526Leaf Summer glycyrrhizin high producing strain9.481

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.579
SRR2868004Drought Stress(Tissue:root)23.254
SRR2967015Control (Tissue:root)30.355

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.347
SRR9715740Leave31.318
SRR9715741Leave35.030
SRR9715739Root29.529
SRR9715742Root35.830
SRR9715743Root33.960

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.278
SRR8749028MeJA induced 9h0.510
SRR8749029MeJA induced 9h0.344
SRR8749030Uninduced1.121
SRR8749031Uninduced0.194
SRR8749032Uninduced0.831

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.322
SRR8400027Control-Root29.783

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved