Gene detail information of Glyur000004s00000510.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37590.1 | 1.00E-25 | DNA binding with one finger 2.4 |
| NR | KHN33393.1 | 8.44E-84 | Dof zinc finger protein DOF3.6 [Glycine soja] |
| Swissprot | tr|O80928|DOF24_ARATH | 2.00E-43 | Dof zinc finger protein DOF2.4 |
| trEMBL | tr|I1MDG2|I1MDG2_SOYBN | 5.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G04430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 799499 | 801023 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2C2-Dof |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000004s00000510.1 | PF02701.10 | zf-Dof | 64 | 122 | 1.60E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.098 |
| SRR1783600 | control | 7.111 |
| SRR1783602 | moderate drought stress | 6.545 |
| SRR1811619 | moderate drought stress | 6.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.079 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.150 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.147 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.039 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.440 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.108 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.428 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.303 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.283 |
| SRR2967015 | Control (Tissue:root) | 16.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.300 |
| SRR9715740 | Leave | 3.358 |
| SRR9715741 | Leave | 5.549 |
| SRR9715739 | Root | 4.740 |
| SRR9715742 | Root | 11.437 |
| SRR9715743 | Root | 8.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.046 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.133 |
| SRR8400027 | Control-Root | 6.406 |