Gene detail information of Glyur000005s00001005.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G06620.10PAS domain-containing protein tyrosine kinase family protein
NRXP_003594732.10Protein kinase-like protein [Medicago truncatula]
COGYP_001958461.16.00E-44hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FPR3|EDR1_ARATH7.00E-111Serine/threonine-protein kinase EDR1
trEMBLtr|G7IFW1|G7IFW1_MEDTR0PAS domain tyrosine kinase family protein {ECO:0000313|EMBL:AES64983.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000053648041505+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004871  signal transducer activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000005s00001005.1PF13426.1PAS_91011982.10E-14
Glyur000005s00001005.1PF07714.12Pkinase_Tyr4597111.70E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.256
SRR1783600control8.331
SRR1783602moderate drought stress12.171
SRR1811619moderate drought stress12.100

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.390
DRR006520Root Summer glycyrrhizin high producing strain8.496
DRR006521Root Winter glycyrrhizin high producing strain4.936
DRR006522Root Winter glycyrrhizin high producing strain4.507
DRR006523Root Summer glycyrrhizin low producing strain7.667
DRR006524Root Summer glycyrrhizin low producing strain7.911
DRR006525Leaf Summer glycyrrhizin high producing strain6.158
DRR006526Leaf Summer glycyrrhizin high producing strain6.400

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.189
SRR2868004Drought Stress(Tissue:root)21.362
SRR2967015Control (Tissue:root)27.013

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.015
SRR9715740Leave16.322
SRR9715741Leave14.824
SRR9715739Root3.802
SRR9715742Root12.580
SRR9715743Root10.186

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.328
SRR8749028MeJA induced 9h12.449
SRR8749029MeJA induced 9h4.938
SRR8749030Uninduced3.996
SRR8749031Uninduced2.018
SRR8749032Uninduced2.450

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.135
SRR8400027Control-Root20.053

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved