Gene detail information of Glyur000005s00001080.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48750.13.00E-151cell division control 2
NRXP_006597677.10PREDICTED: cell division control protein 2 homolog [Glycine max]
COGYP_315458.14.00E-28Serine/threonine protein kinase [Thiobacillus denitrificans ATCC 25259]
Swissprottr|Q41639|CDC2_VIGAC0Cell division control protein 2 homolog
trEMBLtr|I1MG96|I1MG96_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G14390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00005460810465877-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02206CDK2 EC:2.7.11.22 FoxO signaling pathway map04068
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
p53 signaling pathwaymap04115
Progesterone-mediated oocyte maturationmap04914
Pathways in cancermap05200
Viral carcinogenesismap05203
Prostate cancermap05215
Small cell lung cancermap05222
Measlesmap05162
Hepatitis Bmap05161
Herpes simplex infectionmap05168
Epstein-Barr virus infectionmap05169


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000005s00001080.1PF00069.20Pkinase42874.50E-78


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control37.585
SRR1783600control38.003
SRR1783602moderate drought stress28.118
SRR1811619moderate drought stress28.155

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.583
DRR006520Root Summer glycyrrhizin high producing strain29.185
DRR006521Root Winter glycyrrhizin high producing strain2.559
DRR006522Root Winter glycyrrhizin high producing strain2.503
DRR006523Root Summer glycyrrhizin low producing strain18.990
DRR006524Root Summer glycyrrhizin low producing strain19.300
DRR006525Leaf Summer glycyrrhizin high producing strain7.274
DRR006526Leaf Summer glycyrrhizin high producing strain7.329

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)54.003
SRR2868004Drought Stress(Tissue:root)39.858
SRR2967015Control (Tissue:root)47.205

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.557
SRR9715740Leave3.613
SRR9715741Leave4.682
SRR9715739Root19.515
SRR9715742Root14.762
SRR9715743Root14.717

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h41.725
SRR8749028MeJA induced 9h24.688
SRR8749029MeJA induced 9h33.112
SRR8749030Uninduced7.905
SRR8749031Uninduced1.941
SRR8749032Uninduced6.893

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root49.896
SRR8400027Control-Root44.691

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved