Gene detail

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Gene detail information of Glyur000006s00001625.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G19270.1	0	cytochrome P450, family 707, subfamily A, polypeptide 4
NR	XP_004505218.1	0	PREDICTED: abscisic acid 8'-hydroxylase 4-like isoform X1 [Cicer arietinum]
COG	YP_001659897.1	5.00E-72	cytochrome P450 [Microcystis aeruginosa NIES-843]
Swissprot	tr\|Q9LJK2\|ABAH4_ARATH	0	Abscisic acid 8'-hydroxylase 4
trEMBL	tr\|I1KLZ9\|I1KLZ9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G33560.1}

Sequence

Transcript Sequence

>Glyur000006s00001625.1
ATGGAAACTATTGCTATTTTAGTTTCCATCTTCCTCTTTCTCTCAACTCTACTTTCGTATCCACTCATAAAGAAGAAACACAATAAGAAATCCAAACTAATTACAGCTAAGCCTAAGCTCCCCCCGGGTTCAATGGGTTGGCCTTACATAGGAGAAACTCTTCAACTCTATTCCCAGGACCCTAACATCTTCTTTGCTTCAAAACAGAAAAGCTATGGAGAAATTTTCAAAACACACATATTGGGTTGTCCTTGCGTGATGCTGGCAAGCCCTGAGGCAGCGAGGTTTGTGCTGGTCACACATGCTCACTTGTTCAAGCCTACATACCCCAAAAGCAAAGAGAAGCTTATAGGCTCTGCTGCATTGTTCTTCCACCAAGGAGAATACCACACTCGCATTAGGAAACTGGTTCAAACCTCACTTTCTCCTGAATCAATCAAGAAATTGATCCCACACATCGAAACCGAGGTCATTTCAGCCTTGGAATCGTGGGCTTCCATGGGACAAGTCATTAACGCTTTCCAAGAAATGAAAAAGTTCTCATTCAATATCGGCATCCTTTCTGTCTTTGGTAACTTGGAATGCAATTACAGAGAGCAGCTTAGGAAGAACTATTGCATAGTAGAGAAAGGCTACAATTCTTTCCCAACTACGATACCAGGAACCGCATACTCCAAAGCACTTTTGGCGAGGAAGAGAATCAGAGAGATCATGAGTGAGATAATTTGTAAGAGAAAGGAGCAGAGATTGACTGAGAAGGATCTGTTAGGCCACATGTTGAGCTACAAGGATGAAAAAGGACAACCACTAACAGATGACCAAATTGCTGATAATGTAATTGGGGTACTGTTTGCAGCTCAGGATACTACAGCAAGCGTTCTAACTTGGATTCTAAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAGTAAAAACAGAGCAAATGGCAGTATATGAAGCCAATGAAGGAGGGAAGATGCCGTTGACATGGGGTCACACCAGAAATATGCCAATTACTCATAGGGTAATACTAGAAAGCCTGAGGATGGCAAGCATTATATCATTTACCTATAGGGAAGCTGTGGTTGATGTAGTATACAAGGGATATCTTATACCAAAGGGTTGGAAAGTAATGCCACTGTTCAGGAACATCCATCATAATCCAGAGTTCTACNGTGCTCCTTACAATTTTGACCCATCAAGGTTTGAGGTTGCTCCAAAGCCCAATACTTTTGTGCCATTTGGCACTGGGGTGCACTCTTGTCCAGGAAATGAACTTGCCAAATTGAACATGTTGATTTTAGTTCACCATCTAGTAACCAAATTTAGGTGGGAGGTAGAAGGATATCAAAGTGGAATTCAATATAGTCCATTTCCAGTACCACTGCATGGTCTACCGACAAGATTTTGGAGAAATAATTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00006	123836	126415	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP707A4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K09843	E1.14.13.93	EC:1.14.13.93	Carotenoid biosynthesis	map00906

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000006s00001625.1	PF00067.17	p450	41	448	8.80E-71

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.186
DRR006524	Root Summer glycyrrhizin low producing strain	0.309
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.516
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.580

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.120
SRR2868004	Drought Stress(Tissue:root)	0.441
SRR2967015	Control (Tissue:root)	0.397

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.460
SRR9715740	Leave	0.492
SRR9715741	Leave	0.382
SRR9715739	Root	0.000
SRR9715742	Root	0.066
SRR9715743	Root	0.001

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.001
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.003
SRR8749030	Uninduced	0.029
SRR8749031	Uninduced	0.028
SRR8749032	Uninduced	0.031

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.135
SRR8400027	Control-Root	0.498