Gene detail information of Glyur000006s00001648.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KCW55230.1 | 1.33E-13 | hypothetical protein EUGRSUZ_I01164 [Eucalyptus grandis] |
| trEMBL | tr|A0A059AP84|A0A059AP84_EUCGR | 5.00E-14 | Uncharacterized protein {ECO:0000313|EMBL:KCW55230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 289787 | 290275 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 49.049 |
| SRR1783600 | control | 45.183 |
| SRR1783602 | moderate drought stress | 52.717 |
| SRR1811619 | moderate drought stress | 48.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.305 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.964 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.215 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.443 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.777 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.314 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.887 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.511 |
| SRR2967015 | Control (Tissue:root) | 3.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.764 |
| SRR9715740 | Leave | 4.933 |
| SRR9715741 | Leave | 6.404 |
| SRR9715739 | Root | 11.797 |
| SRR9715742 | Root | 12.054 |
| SRR9715743 | Root | 16.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.781 |
| SRR8749028 | MeJA induced 9h | 2.883 |
| SRR8749029 | MeJA induced 9h | 3.826 |
| SRR8749030 | Uninduced | 1.585 |
| SRR8749031 | Uninduced | 0.618 |
| SRR8749032 | Uninduced | 3.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.523 |
| SRR8400027 | Control-Root | 7.462 |