Gene detail information of Glyur000006s00001657.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G50530.12.00E-95CDPK-related kinase
NRXP_007156536.12.95E-176hypothetical protein PHAVU_003G294300g [Phaseolus vulgaris]
COGYP_007468874.11.00E-11serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q9SCS2|CAMK5_ARATH2.00E-123CDPK-related kinase 5
trEMBLtr|A0A067E5J0|A0A067E5J0_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO49130.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00006335532340812-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000006s00001657.1PF00069.20Pkinase1442851.40E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.064
SRR1783600control38.105
SRR1783602moderate drought stress36.874
SRR1811619moderate drought stress36.803

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain50.840
DRR006520Root Summer glycyrrhizin high producing strain50.849
DRR006521Root Winter glycyrrhizin high producing strain16.114
DRR006522Root Winter glycyrrhizin high producing strain15.496
DRR006523Root Summer glycyrrhizin low producing strain25.637
DRR006524Root Summer glycyrrhizin low producing strain26.606
DRR006525Leaf Summer glycyrrhizin high producing strain20.786
DRR006526Leaf Summer glycyrrhizin high producing strain20.584

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)118.331
SRR2868004Drought Stress(Tissue:root)135.069
SRR2967015Control (Tissue:root)113.102

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave52.921
SRR9715740Leave69.444
SRR9715741Leave70.701
SRR9715739Root29.530
SRR9715742Root54.726
SRR9715743Root45.983

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.113
SRR8749028MeJA induced 9h13.370
SRR8749029MeJA induced 9h7.661
SRR8749030Uninduced12.281
SRR8749031Uninduced9.725
SRR8749032Uninduced9.562

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root81.871
SRR8400027Control-Root73.043

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved