Gene detail information of Glyur000006s00001667.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37180.1 | 3.00E-42 | Homeodomain-like superfamily protein |
| NR | KEH30918.1 | 0 | myb-like transcription factor family protein [Medicago truncatula] |
| Swissprot | tr|Q9LTH4|PCLL_ARATH | 2.00E-14 | Transcription factor BOA |
| trEMBL | tr|A0A072UPI8|A0A072UPI8_MEDTR | 0 | Myb-like transcription factor family protein {ECO:0000313|EMBL:KEH30918.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 395551 | 398903 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
| EAR motif-containing Proteins | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000006s00001667.1 | PF00249.26 | Myb_DNA-binding | 269 | 320 | 8.70E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.462 |
| SRR1783600 | control | 22.616 |
| SRR1783602 | moderate drought stress | 26.108 |
| SRR1811619 | moderate drought stress | 26.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.968 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.089 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.972 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.875 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.613 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.741 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.003 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 24.490 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.600 |
| SRR2967015 | Control (Tissue:root) | 28.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 23.077 |
| SRR9715740 | Leave | 34.543 |
| SRR9715741 | Leave | 30.334 |
| SRR9715739 | Root | 12.033 |
| SRR9715742 | Root | 26.924 |
| SRR9715743 | Root | 22.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.514 |
| SRR8749028 | MeJA induced 9h | 46.242 |
| SRR8749029 | MeJA induced 9h | 57.120 |
| SRR8749030 | Uninduced | 39.496 |
| SRR8749031 | Uninduced | 110.509 |
| SRR8749032 | Uninduced | 60.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.584 |
| SRR8400027 | Control-Root | 8.884 |