Gene detail information of Glyur000006s00001668.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33950.10Protein kinase superfamily protein
NRXP_007042345.10Kinase superfamily protein isoform 2 [Theobroma cacao]
COGYP_004862245.13.00E-26protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|Q940H6|SRK2E_ARATH0Serine/threonine-protein kinase SRK2E
trEMBLtr|A0A061E7H5|A0A061E7H5_THECC0Kinase superfamily protein isoform 2 {ECO:0000313|EMBL:EOX98178.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00006420869424843+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000006s00001668.1PF00069.20Pkinase232796.90E-71


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.437
SRR1783600control30.442
SRR1783602moderate drought stress47.404
SRR1811619moderate drought stress47.314

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.407
DRR006520Root Summer glycyrrhizin high producing strain30.270
DRR006521Root Winter glycyrrhizin high producing strain47.839
DRR006522Root Winter glycyrrhizin high producing strain46.733
DRR006523Root Summer glycyrrhizin low producing strain35.472
DRR006524Root Summer glycyrrhizin low producing strain35.676
DRR006525Leaf Summer glycyrrhizin high producing strain45.863
DRR006526Leaf Summer glycyrrhizin high producing strain45.171

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.361
SRR2868004Drought Stress(Tissue:root)31.234
SRR2967015Control (Tissue:root)34.634

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave46.196
SRR9715740Leave53.250
SRR9715741Leave54.147
SRR9715739Root13.377
SRR9715742Root28.101
SRR9715743Root24.702

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.667
SRR8749028MeJA induced 9h10.321
SRR8749029MeJA induced 9h5.524
SRR8749030Uninduced5.340
SRR8749031Uninduced2.222
SRR8749032Uninduced3.132

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.586
SRR8400027Control-Root30.258

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved