Gene detail information of Glyur000006s00001702.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G43750.22.00E-138O-acetylserine (thiol) lyase B
NRNP_001235131.10OAS-TL4 cysteine synthase [Glycine max]
COGYP_591171.12.00E-115cysteine synthase [Candidatus Koribacter versatilis Ellin345]
Swissprottr|O81155|CYSKP_SOLTU5.00E-176Cysteine synthase, chloroplastic/chromoplastic (Precursor)
trEMBLtr|A5YT88|A5YT88_SOYBN0Cysteine synthase {ECO:0000256|RuleBase:RU003985}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00006614917619835-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01738cysK EC:2.5.1.47 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270


Gene Ontology

biological_process

GO:0006535  cysteine biosynthetic process from serine



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000006s00001702.1PF00291.20PALP743333.60E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control94.334
SRR1783600control93.832
SRR1783602moderate drought stress63.581
SRR1811619moderate drought stress63.555

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain84.048
DRR006520Root Summer glycyrrhizin high producing strain82.613
DRR006521Root Winter glycyrrhizin high producing strain29.335
DRR006522Root Winter glycyrrhizin high producing strain28.544
DRR006523Root Summer glycyrrhizin low producing strain59.075
DRR006524Root Summer glycyrrhizin low producing strain57.241
DRR006525Leaf Summer glycyrrhizin high producing strain209.445
DRR006526Leaf Summer glycyrrhizin high producing strain207.597

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)106.232
SRR2868004Drought Stress(Tissue:root)85.726
SRR2967015Control (Tissue:root)78.392

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave180.213
SRR9715740Leave215.730
SRR9715741Leave181.834
SRR9715739Root40.300
SRR9715742Root53.447
SRR9715743Root51.938

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h103.286
SRR8749028MeJA induced 9h78.834
SRR8749029MeJA induced 9h88.807
SRR8749030Uninduced72.401
SRR8749031Uninduced76.650
SRR8749032Uninduced46.966

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root87.877
SRR8400027Control-Root84.845

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved