Gene detail information of Glyur000006s00001714.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40200.1 | 1.00E-30 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003529368.1 | 8.66E-127 | PREDICTED: transcription factor bHLH30-like [Glycine max] |
| Swissprot | tr|Q9XEF0|BH051_ARATH | 4.00E-36 | Transcription factor bHLH51 |
| trEMBL | tr|I1KLT6|I1KLT6_SOYBN | 3.00E-127 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G32690.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 678853 | 682387 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000006s00001714.1 | PF00010.21 | HLH | 62 | 108 | 2.30E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.859 |
| SRR1783600 | control | 13.020 |
| SRR1783602 | moderate drought stress | 11.985 |
| SRR1811619 | moderate drought stress | 11.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.851 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.972 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.932 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.713 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.940 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.493 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.268 |
| SRR2868004 | Drought Stress(Tissue:root) | 26.388 |
| SRR2967015 | Control (Tissue:root) | 16.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 18.817 |
| SRR9715740 | Leave | 33.042 |
| SRR9715741 | Leave | 26.204 |
| SRR9715739 | Root | 6.095 |
| SRR9715742 | Root | 7.540 |
| SRR9715743 | Root | 6.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.027 |
| SRR8749028 | MeJA induced 9h | 23.535 |
| SRR8749029 | MeJA induced 9h | 11.392 |
| SRR8749030 | Uninduced | 8.109 |
| SRR8749031 | Uninduced | 3.471 |
| SRR8749032 | Uninduced | 3.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.843 |
| SRR8400027 | Control-Root | 22.482 |