Gene detail information of Glyur000007s00002776.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11670.10UDP-Glycosyltransferase superfamily protein
NRQ6DW74.10RecName: Full=Digalactosyldiacylglycerol synthase 1, chloroplastic; Flags: Precursor [Lotus japonicus]
COGNP_489381.12.00E-08hypothetical protein all5341 [Nostoc sp. PCC 7120]
Swissprottr|Q6DW74|DGDG1_LOTJA0Digalactosyldiacylglycerol synthase 1, chloroplastic (Precursor)
trEMBLtr|Q07A01|Q07A01_VIGUN0Digalactosyldiacylglycerol synthase 1 {ECO:0000313|EMBL:ABA55727.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000076393870413-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09480E2.4.1.241 EC:2.4.1.241 Glycerolipid metabolism map00561


Gene Ontology

biological_process

GO:0009058  biosynthetic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000007s00002776.1PF00534.15Glycos_transf_15216565.20E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control177.990
SRR1783600control179.014
SRR1783602moderate drought stress195.627
SRR1811619moderate drought stress194.541

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain89.813
DRR006520Root Summer glycyrrhizin high producing strain89.132
DRR006521Root Winter glycyrrhizin high producing strain119.570
DRR006522Root Winter glycyrrhizin high producing strain116.535
DRR006523Root Summer glycyrrhizin low producing strain93.589
DRR006524Root Summer glycyrrhizin low producing strain94.818
DRR006525Leaf Summer glycyrrhizin high producing strain95.423
DRR006526Leaf Summer glycyrrhizin high producing strain95.280

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.081
SRR2868004Drought Stress(Tissue:root)41.412
SRR2967015Control (Tissue:root)32.089

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave103.050
SRR9715740Leave102.737
SRR9715741Leave126.306
SRR9715739Root34.999
SRR9715742Root145.220
SRR9715743Root123.022

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.325
SRR8749028MeJA induced 9h26.414
SRR8749029MeJA induced 9h26.498
SRR8749030Uninduced18.940
SRR8749031Uninduced26.664
SRR8749032Uninduced23.367

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root192.737
SRR8400027Control-Root233.996

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved