Gene detail information of Glyur000007s00002778.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01820.10Leucine-rich repeat protein kinase family protein
NRXP_004494248.10PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum]
COGYP_004775215.11.00E-23RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|P43298|TMK1_ARATH0Probable receptor protein kinase TMK1 (Precursor)
trEMBLtr|A0A072U3D4|A0A072U3D4_MEDTR0Receptor-kinase-like protein {ECO:0000313|EMBL:KEH24239.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000078616490176+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000007s00002778.1PF08263.7LRRNT_230700.00043
Glyur000007s00002778.1PF00560.28LRR_11992180.83
Glyur000007s00002778.1PF08263.7LRRNT_23393741.80E-05
Glyur000007s00002778.1PF00560.28LRR_14264460.11
Glyur000007s00002778.1PF00069.20Pkinase6168861.20E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control48.794
SRR1783600control49.106
SRR1783602moderate drought stress34.774
SRR1811619moderate drought stress34.469

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain48.055
DRR006520Root Summer glycyrrhizin high producing strain47.442
DRR006521Root Winter glycyrrhizin high producing strain3.314
DRR006522Root Winter glycyrrhizin high producing strain3.265
DRR006523Root Summer glycyrrhizin low producing strain29.707
DRR006524Root Summer glycyrrhizin low producing strain29.551
DRR006525Leaf Summer glycyrrhizin high producing strain9.330
DRR006526Leaf Summer glycyrrhizin high producing strain9.249

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)55.393
SRR2868004Drought Stress(Tissue:root)48.558
SRR2967015Control (Tissue:root)44.406

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.538
SRR9715740Leave7.251
SRR9715741Leave10.207
SRR9715739Root71.108
SRR9715742Root48.293
SRR9715743Root53.236

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.071
SRR8749028MeJA induced 9h2.398
SRR8749029MeJA induced 9h1.303
SRR8749030Uninduced0.601
SRR8749031Uninduced0.117
SRR8749032Uninduced0.361

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root64.745
SRR8400027Control-Root78.953

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved