Gene detail information of Glyur000007s00002799.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36026.1 | 1.00E-24 | Ovate family protein |
| NR | XP_004494234.1 | 9.40E-78 | PREDICTED: uncharacterized protein LOC101498037 [Cicer arietinum] |
| Swissprot | tr|Q3EAL1|OFP6_ARATH | 3.00E-30 | Transcription repressor OFP6 |
| trEMBL | tr|G7ZUW3|G7ZUW3_MEDTR | 5.00E-72 | Ovate transcriptional repressor {ECO:0000313|EMBL:KEH24201.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 200493 | 202079 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002799.1 | PF04844.8 | Ovate | 120 | 178 | 5.60E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.750 |
| SRR1783600 | control | 2.529 |
| SRR1783602 | moderate drought stress | 1.781 |
| SRR1811619 | moderate drought stress | 1.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.543 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.757 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.533 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.921 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.696 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.697 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.843 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.022 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.190 |
| SRR2967015 | Control (Tissue:root) | 11.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.822 |
| SRR9715740 | Leave | 0.950 |
| SRR9715741 | Leave | 0.717 |
| SRR9715739 | Root | 1.192 |
| SRR9715742 | Root | 0.921 |
| SRR9715743 | Root | 1.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.543 |
| SRR8749028 | MeJA induced 9h | 0.927 |
| SRR8749029 | MeJA induced 9h | 1.710 |
| SRR8749030 | Uninduced | 1.175 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.929 |
| SRR8400027 | Control-Root | 6.332 |