Gene detail information of Glyur000007s00002801.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04820.1 | 1.00E-24 | ovate family protein 13 |
| NR | XP_003635864.1 | 2.94E-75 | hypothetical protein MTR_013s0007 [Medicago truncatula] |
| Swissprot | tr|Q9FMC8|OPF13_ARATH | 2.00E-40 | Transcription repressor OFP13 |
| trEMBL | tr|G7ZUW4|G7ZUW4_MEDTR | 1.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:AFK37360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 212043 | 212882 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002801.1 | PF04844.8 | Ovate | 139 | 194 | 5.40E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.173 |
| SRR1783600 | control | 0.088 |
| SRR1783602 | moderate drought stress | 0.150 |
| SRR1811619 | moderate drought stress | 0.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.983 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.560 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.363 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.717 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.782 |
| SRR2967015 | Control (Tissue:root) | 0.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.106 |
| SRR9715740 | Leave | 0.977 |
| SRR9715741 | Leave | 2.625 |
| SRR9715739 | Root | 0.234 |
| SRR9715742 | Root | 0.176 |
| SRR9715743 | Root | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.263 |
| SRR8749028 | MeJA induced 9h | 2.181 |
| SRR8749029 | MeJA induced 9h | 6.022 |
| SRR8749030 | Uninduced | 0.122 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.131 |
| SRR8400027 | Control-Root | 0.329 |