Gene detail information of Glyur000007s00002806.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06270.1 | 1.00E-23 | |
| NR | XP_007162948.1 | 3.10E-57 | hypothetical protein PHAVU_001G193700g [Phaseolus vulgaris] |
| trEMBL | tr|V7CXM7|V7CXM7_PHAVU | 1.00E-57 | Uncharacterized protein {ECO:0000313|EMBL:ESW34942.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 235498 | 236766 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.663 |
| SRR1783600 | control | 2.486 |
| SRR1783602 | moderate drought stress | 2.406 |
| SRR1811619 | moderate drought stress | 2.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.224 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.393 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.112 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.455 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.621 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.889 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 23.520 |
| SRR2868004 | Drought Stress(Tissue:root) | 17.551 |
| SRR2967015 | Control (Tissue:root) | 16.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.248 |
| SRR9715740 | Leave | 3.673 |
| SRR9715741 | Leave | 1.249 |
| SRR9715739 | Root | 3.053 |
| SRR9715742 | Root | 2.085 |
| SRR9715743 | Root | 3.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.999 |
| SRR8749028 | MeJA induced 9h | 4.546 |
| SRR8749029 | MeJA induced 9h | 1.787 |
| SRR8749030 | Uninduced | 1.819 |
| SRR8749031 | Uninduced | 1.955 |
| SRR8749032 | Uninduced | 0.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.889 |
| SRR8400027 | Control-Root | 5.746 |