Gene detail information of Glyur000007s00002816.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24280.1 | 2.00E-65 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004494225.1 | 1.97E-145 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cicer arietinum] |
| trEMBL | tr|K7MZA3|K7MZA3_SOYBN | 2.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G38351.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 287723 | 302932 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01285 | PRCP | EC:3.4.16.2 | Renin-angiotensin system | map04614 |
| Protein digestion and absorption | map04974 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002816.1 | PF05577.7 | Peptidase_S28 | 17 | 178 | 1.50E-12 |
| Glyur000007s00002816.1 | PF05577.7 | Peptidase_S28 | 202 | 452 | 2.00E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.540 |
| SRR1783600 | control | 0.590 |
| SRR1783602 | moderate drought stress | 0.504 |
| SRR1811619 | moderate drought stress | 0.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.154 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.077 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.055 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 64.517 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 65.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.860 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.248 |
| SRR2967015 | Control (Tissue:root) | 6.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 17.327 |
| SRR9715740 | Leave | 11.857 |
| SRR9715741 | Leave | 10.509 |
| SRR9715739 | Root | 0.071 |
| SRR9715742 | Root | 0.267 |
| SRR9715743 | Root | 0.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.326 |
| SRR8749028 | MeJA induced 9h | 0.093 |
| SRR8749029 | MeJA induced 9h | 0.890 |
| SRR8749030 | Uninduced | 0.031 |
| SRR8749031 | Uninduced | 0.037 |
| SRR8749032 | Uninduced | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.042 |
| SRR8400027 | Control-Root | 6.012 |