Gene detail information of Glyur000007s00002819.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06250.2 | 3.00E-40 | AP2/B3-like transcriptional factor family protein |
| NR | XP_004494224.1 | 3.59E-101 | PREDICTED: B3 domain-containing protein At2g36080-like [Cicer arietinum] |
| Swissprot | tr|Q9FNI3|Y5625_ARATH | 4.00E-63 | B3 domain-containing protein At5g06250 |
| trEMBL | tr|K7KG32|K7KG32_SOYBN | 8.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G35700.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 310310 | 312168 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002819.1 | PF02362.16 | B3 | 103 | 206 | 7.70E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.631 |
| SRR1783600 | control | 0.585 |
| SRR1783602 | moderate drought stress | 1.675 |
| SRR1811619 | moderate drought stress | 1.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.166 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.395 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.107 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.068 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.183 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.804 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.712 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.959 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.438 |
| SRR2967015 | Control (Tissue:root) | 5.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.768 |
| SRR9715740 | Leave | 1.310 |
| SRR9715741 | Leave | 2.075 |
| SRR9715739 | Root | 17.750 |
| SRR9715742 | Root | 15.749 |
| SRR9715743 | Root | 16.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.267 |
| SRR8749028 | MeJA induced 9h | 1.918 |
| SRR8749029 | MeJA induced 9h | 5.073 |
| SRR8749030 | Uninduced | 1.354 |
| SRR8749031 | Uninduced | 0.432 |
| SRR8749032 | Uninduced | 2.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.308 |
| SRR8400027 | Control-Root | 3.855 |