Gene detail information of Glyur000007s00002831.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G36130.17.00E-74Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
NRKHN18795.12.16E-114Peptidyl-prolyl cis-trans isomerase-like 1 [Glycine soja]
COGYP_005845634.16.00E-60peptidyl-prolyl cis-trans isomerase A [Ignavibacterium album JCM 16511]
Swissprottr|Q9SIH1|CP18B_ARATH6.00E-104Peptidyl-prolyl cis-trans isomerase CYP18-2
trEMBLtr|C6TF56|C6TF56_SOYBN3.00E-114Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00007353736357264+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12733PPIL1 EC:5.2.1.8 Spliceosome map03040


Gene Ontology

biological_process

GO:0000413  protein peptidyl-prolyl isomerization

GO:0006457  protein folding


molecular_function

GO:0003755  peptidyl-prolyl cis-trans isomerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000007s00002831.1PF00160.16Pro_isomerase121612.40E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control60.605
SRR1783600control61.187
SRR1783602moderate drought stress56.677
SRR1811619moderate drought stress56.090

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain79.314
DRR006520Root Summer glycyrrhizin high producing strain78.793
DRR006521Root Winter glycyrrhizin high producing strain41.355
DRR006522Root Winter glycyrrhizin high producing strain40.499
DRR006523Root Summer glycyrrhizin low producing strain63.205
DRR006524Root Summer glycyrrhizin low producing strain62.755
DRR006525Leaf Summer glycyrrhizin high producing strain28.425
DRR006526Leaf Summer glycyrrhizin high producing strain27.800

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)65.667
SRR2868004Drought Stress(Tissue:root)46.195
SRR2967015Control (Tissue:root)37.684

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.682
SRR9715740Leave42.092
SRR9715741Leave43.831
SRR9715739Root16.198
SRR9715742Root25.639
SRR9715743Root23.621

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h140.976
SRR8749028MeJA induced 9h76.197
SRR8749029MeJA induced 9h145.510
SRR8749030Uninduced35.214
SRR8749031Uninduced44.639
SRR8749032Uninduced40.206

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root70.107
SRR8400027Control-Root64.816

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved