Gene detail information of Glyur000007s00002841.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22380.1 | 8.00E-16 | NAC domain containing protein 90 |
| NR | XP_003553602.1 | 3.36E-31 | PREDICTED: NAC domain-containing protein 90-like [Glycine max] |
| Swissprot | tr|Q9FMR3|NAC90_ARATH | 6.00E-19 | NAC domain-containing protein 90 |
| trEMBL | tr|K7MZ95|K7MZ95_SOYBN | 1.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G38211.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 407358 | 408415 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002841.1 | PF02365.10 | NAM | 4 | 67 | 9.30E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.461 |
| SRR1783600 | control | 0.245 |
| SRR1783602 | moderate drought stress | 0.062 |
| SRR1811619 | moderate drought stress | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.388 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.176 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.101 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.374 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.111 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.634 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.066 |
| SRR2967015 | Control (Tissue:root) | 1.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 22.017 |
| SRR9715740 | Leave | 13.469 |
| SRR9715741 | Leave | 40.858 |
| SRR9715739 | Root | 0.715 |
| SRR9715742 | Root | 2.228 |
| SRR9715743 | Root | 4.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.114 |
| SRR8749028 | MeJA induced 9h | 0.048 |
| SRR8749029 | MeJA induced 9h | 0.190 |
| SRR8749030 | Uninduced | 0.107 |
| SRR8749031 | Uninduced | 0.058 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.139 |
| SRR8400027 | Control-Root | 0.895 |