Gene detail information of Glyur000007s00002844.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G52600.10cell wall invertase 2
NRXP_003625858.10Beta-fructofuranosidase, insoluble isoenzyme [Medicago truncatula]
COGYP_004640399.15.00E-49sucrose-6-phosphate hydrolase [Paenibacillus mucilaginosus KNP414]
Swissprottr|P26792|INV1_DAUCA0Beta-fructofuranosidase, insoluble isoenzyme 1 (Precursor)
trEMBLtr|Q2HTE2|Q2HTE2_MEDTR0Sialidase {ECO:0000313|EMBL:ABD32689.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00007429837436352-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH32


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01193INV, sacA EC:3.2.1.26 Galactose metabolism map00052
Starch and sucrose metabolismmap00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000007s00002844.1PF00251.15Glyco_hydro_32N523664.80E-108
Glyur000007s00002844.1PF08244.7Glyco_hydro_32C4175004.70E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.134
SRR1783600control0.145
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.007

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.252
DRR006520Root Summer glycyrrhizin high producing strain0.228
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.830
DRR006526Leaf Summer glycyrrhizin high producing strain0.761

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.902
SRR2868004Drought Stress(Tissue:root)1.139
SRR2967015Control (Tissue:root)0.756

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.829
SRR9715740Leave8.140
SRR9715741Leave16.310
SRR9715739Root0.030
SRR9715742Root0.260
SRR9715743Root0.135

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.127
SRR8749028MeJA induced 9h0.546
SRR8749029MeJA induced 9h0.354
SRR8749030Uninduced0.296
SRR8749031Uninduced0.040
SRR8749032Uninduced0.135

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.387
SRR8400027Control-Root0.408

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved