Gene detail

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Gene detail information of Glyur000008s00001253.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G62230.1	0	ERECTA-like 1
NR	XP_006588388.1	0	PREDICTED: ERECTA-like kinase isoform X2 [Glycine max]
COG	YP_001192956.1	3.00E-59	two component regulator [Flavobacterium johnsoniae UW101]
Swissprot	tr\|C0LGW6\|ERL1_ARATH	0	LRR receptor-like serine/threonine-protein kinase ERL1 {ECO:0000303\|PubMed:14985254} (Precursor)
trEMBL	tr\|I1LDY4\|I1LDY4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G38730.1}

Sequence

Transcript Sequence

>Glyur000008s00001253.1
ATGGAAGAAGATGATGGGTTGTTGGTGCTGTTGTTCTATGGTAGACAGCAGAAGCGGAGGTTTCTGATGTTTCCCGTGACAGTGGTGCTGTTTATAATGCTGTTACTTCTCTCTCCATTTGCTTTGTCACTCAGCGAAGAAGCGTCTGCTTCCCAAAAGCTTCTTCTCTTGTTTGTGGTTCTGGTTTTCACCCTTGGGTTTGGTCTTAAGAGTACCCAAAATGCGAACTTTTCCTTTGCTTTTCCCAGAAGATTGGAAGAGTGGTTAACTGTTGTGGTTTTGTTCGCTTTCAAACGCATTCCAGTGATAGATTCATACGTCAGTGAGGTTTTGAAGTGTCTGACTTTTCAATGCATAGGACAAGCATTAATGGCGATGAAGGCTTCCTTCAGCAGCAATATAGCTGACGTTCTTCTTGATTGGGATGACGTGCACAATGATGACTTCTGCTCTTGGCGTGGAGTCTTTTGTGATAATGTCAGCCTTTCTGTGGTATCTCTGTGCGTCTTTTATTCCTGGGACTATTTGCTTCACCCTTCAGTTATCTTAATCTCATTAGCTACATTTTTGAATCTGTCAAGCTTGAACCTGGGTGGGGAGATATCACCAACCATTGGTGATTTAACAAACCTGCAATCCATAGACCTGCAAGGGAATAAACTAACCGGTCAAATCCCAGATGAAATTGGGAACTGTGCTGCACTTATTCATCTGGATTTATCTGATAATCAGCTATATGGTGATATACCTTTCTCCGTTTCAAAGCTTAAGCAACTGGAGTTTTTGAATTTAAAGAGTAATCAGTTGACTGGTCCCATTCCTTCAACTTTAACCCAAATTCCGAACCTGAAGACTCTTGATCTTGCTCGTAATAGGCTCACTGGAGAGATACCAAGACTACTCTATTGGAATGAAGTCTTGCAGTACCTTGGGTTGCGAGGGAACATGTTGAGTGGAACTTTGTCACCTGATATTTGCCAACTAACTGGTTTATGGTATTTTGATGTCAGAGGCAATAATTTAACTGGGACCATTCCTGACAGCATAGGGAACTGTACAAGCTTTGAAATTTTGGACATATCATATAATCAGATTACTGGGGAGATTCCTTATAATATTGGTTTCCTTCAAGTGGCTACTTTATCACTTCAAGGAAATCGGTTGACTGGGAATATTCCAGAAGTGATTGGTTTAATGCAAGCCCTTGCAATTTTGGATTTGAGTGAGAATGAGTTAGTGGGATCAATTCCTCCAATTCTAGGCAATCTGTCTTTCACCGGCAAGCTGTACCTTCATGGAAACAAGCTCACTGGTCCAATACCTCCTGAACTTGGCAATATGTCTAAGTTGAGCTATCTGCAATTGAATGATAATCAACTGGTGGGTAAAATTCCTAATGAGTTTGGGAAGCTTGAACATCTGTTTGAATTGAATCTTGCCAATAATCGTCTTGATGGATCTATTCCACATAACATAAGCTCCTGCACTGCCTTAAATCAGTTTAATGTGCATGGTAATCAGTTAAGCGGTTCTATNCCATTAAGCTTCCGCAGCCTCGAGAGTTTGACTTACTTAAATCTATCTGCCAACAACTTCAAGGGGACTATACCAGTTGAGTTGGGCCATATCATTAATCTGGATACTTTGGACCTATCTAGCAATAATTTTTCTGGACATGTCCCGGCATCTGTTGGTTATCTAGAGCATCTTTTGACACTGAACTTGAGTCATAACCGGCTTGATGGTCCCTTGCCTGCTGAATTTGGGAACNTGAGAAGCATACAGATTATTGATATGTCATTCAACAACCTGTCGGGCAGCATTCCTCTGGAAATTGGGCAGCTACAGAACCTTGTGTCTCTGATTTTGAACAACAATGACATGCGTGGGAAGATTCCTGATCAGCTGACTAATTGTTTTAGTCTTTCCTCCCTAAACTTATCTTATAACAACTTTTCTGGAGTAATTCCAATTATGAAGAACTTCTCGCGGTTTTCAGCTGACAGCTTTATTGGAAATCCTTTGTTATGTGGAAATTGGGTAGGATCAATATGTCGTCCTTATGTGCCAAAAGCAAGAGAGCTTTTTTCGAGAGTTGCAGTTGTATGTCTCACGCTTGGTATCATCACGTTGTTGGCTATGGTAATTGTTGCTTTCTATAGATCCAGCCAATCAAAGCAATTGATGAAAGGATCTAGCAGGACTGGGCAAGGGCCCCCTAAACTTGTAATTCTTCATATGGATATGGCTATCCACACCTTGGATGATATAATGAGAAGCACTGAGAATCTCAGTGAGAAATATATAATTGGTTATGGTGCCTCTAGTACTGTATACAAGTGTGCTTTGAAAAATTCTCGACCAATTGCAGTCAAGCGATTGTACAACCAGCATCCACACAACTTAACGGAATTTGAAACGGAACTTGAAACAATTGGCAGCATTAGACATAGAAACCTTGTCACTTTGCATGGTTATGCCCTTACTCCGTATGGGAATCTCCTTTTCTATGACTATATGGCAAATGGCTCTCTGTGGGATCTTCTACATGGTCCCCTGAAGGTGAAACTTGATTGGGAAACACGGTTGAGGATTGCTGTTGGAGCTGCTGAGGGACTTGCTTATCTTCATCATGACTGCAACCCTCGAATCGTTCACAGGGACATTAAGTCTTCAAATATTTTGCTGGATGAGAACTTTGAGGCCCACCTCTCTGACTTTGGCACTGCCAAATGTATCTCTGCCACAAGAACCCACGCTTCAACTTATGTTCTCGGAACTATAGGCTATATTGACCCCGAGTATGCCCGAACATCTAGGCTGAATGAAAAATCAGATGTATATAGCTTTGGCATTGTTCTGCTGGAGCTACTTACTGGGAAGAAGGCAGTGGACAATGACTCTAATTTGCACCAATTGATATTGTCCAAGGCTGATAATAACACTGTAATGGAGGCAGTGGATCCAGAGGTCTCTATTACCTGCATTGATCTGGCCCATGTTAAGAAGACATTTCAGCTAGCTCTACTTTGCACTAAAAGGAATCCTTCTGAGAGGCCTTCCATGCATGAAGTAGCCAGGGTGCTTGTGTCACTGATTCCTGCACCTCCAAGTAAAGTCGCTGGAGCTCCTGCAAAGACTTTTGACTATGCGCATTTTGTGATTGAGAAGGGACAGCACCATCGAAAATTGGAGGGGCAACAACCTCAGCAAGATAACAATTCTTCCAATGCTCAATGGTTTGTTCGATTTGGGGATGTTATATCCAAGAGCTCCCTCTGAGAGTTGATGAGGGGTGAAAGAAAAAACTACTACTTCTAATGATTTGATATCAACTTAGAAAATAGGGGATGGATCATGTGAATTGTCTAAAACGTTTTAGAACAGTAGAAGCTTAAGAAAGTTTCTACTCTATATTGTACAAGCACTTGTTCCTAGGTACTAGAATATCTCTAATGGTTTTTGCGTAGAT

Protein Sequence

>Glyur000008s00001253.1
MEEDDGLLVLLFYGRQQKRRFLMFPVTVVLFIMLLLLSPFALSLSEEASASQKLLLLFVVLVFTLGFGLKSTQNANFSFAFPRRLEEWLTVVVLFAFKRIPVIDSYVSEVLKCLTFQCIGQALMAMKASFSSNIADVLLDWDDVHNDDFCSWRGVFCDNVSLSVVSLCVFYSWDYLLHPSVILISLATFLNLSSLNLGGEISPTIGDLTNLQSIDLQGNKLTGQIPDEIGNCAALIHLDLSDNQLYGDIPFSVSKLKQLEFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNRLTGNIPEVIGLMQALAILDLSENELVGSIPPILGNLSFTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNDNQLVGKIPNEFGKLEHLFELNLANNRLDGSIPHNISSCTALNQFNVHGNQLSGSXPLSFRSLESLTYLNLSANNFKGTIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNRLDGPLPAEFGNXRSIQIIDMSFNNLSGSIPLEIGQLQNLVSLILNNNDMRGKIPDQLTNCFSLSSLNLSYNNFSGVIPIMKNFSRFSADSFIGNPLLCGNWVGSICRPYVPKARELFSRVAVVCLTLGIITLLAMVIVAFYRSSQSKQLMKGSSRTGQGPPKLVILHMDMAIHTLDDIMRSTENLSEKYIIGYGASSTVYKCALKNSRPIAVKRLYNQHPHNLTEFETELETIGSIRHRNLVTLHGYALTPYGNLLFYDYMANGSLWDLLHGPLKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKCISATRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHQLILSKADNNTVMEAVDPEVSITCIDLAHVKKTFQLALLCTKRNPSERPSMHEVARVLVSLIPAPPSKVAGAPAKTFDYAHFVIEKGQHHRKLEGQQPQQDNNSSNAQWFVRFGDVISKSSL

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00008	4632	12038	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K20718	ER	EC:2.7.11.1	MAPK signaling pathway - plant	map04016

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000008s00001253.1	PF08263.7	LRRNT_2	120	158	7.70E-09
Glyur000008s00001253.1	PF12799.2	LRR_4	209	249	2.00E-06
Glyur000008s00001253.1	PF12799.2	LRR_4	257	294	5.30E-07
Glyur000008s00001253.1	PF13516.1	LRR_6	352	371	0.45
Glyur000008s00001253.1	PF00560.28	LRR_1	521	542	0.34
Glyur000008s00001253.1	PF13855.1	LRR_8	545	604	1.70E-06
Glyur000008s00001253.1	PF00069.20	Pkinase	768	1026	1.90E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.143
SRR1783600	control	1.139
SRR1783602	moderate drought stress	0.516
SRR1811619	moderate drought stress	0.508

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.374
DRR006520	Root Summer glycyrrhizin high producing strain	0.371
DRR006521	Root Winter glycyrrhizin high producing strain	0.127
DRR006522	Root Winter glycyrrhizin high producing strain	0.125
DRR006523	Root Summer glycyrrhizin low producing strain	5.005
DRR006524	Root Summer glycyrrhizin low producing strain	4.972
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.729
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.690

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.237
SRR2868004	Drought Stress(Tissue:root)	0.402
SRR2967015	Control (Tissue:root)	0.437

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	6.084
SRR9715740	Leave	1.831
SRR9715741	Leave	4.258
SRR9715739	Root	0.397
SRR9715742	Root	0.786
SRR9715743	Root	1.030

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.281
SRR8749028	MeJA induced 9h	0.408
SRR8749029	MeJA induced 9h	0.148
SRR8749030	Uninduced	0.315
SRR8749031	Uninduced	0.022
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.484
SRR8400027	Control-Root	1.010