Gene detail information of Glyur000008s00001260.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G04210.10Leucine-rich repeat protein kinase family protein
NRXP_004507387.10PREDICTED: uncharacterized protein LOC101513307 [Cicer arietinum]
COGYP_001869272.12.00E-21Miro domain-containing protein [Nostoc punctiforme PCC 73102]
Swissprottr|Q9CAD5|YODA_ARATH2.00E-18Mitogen-activated protein kinase kinase kinase YODA
trEMBLtr|A0A072UX07|A0A072UX07_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH30365.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000086114668164-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000008s00001260.1PF00560.28LRR_11832000.027
Glyur000008s00001260.1PF13855.1LRR_82092607.40E-07
Glyur000008s00001260.1PF14381.1EDR16907774.50E-14
Glyur000008s00001260.1PF00069.20Pkinase85311252.80E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.179
SRR1783600control8.257
SRR1783602moderate drought stress8.049
SRR1811619moderate drought stress7.979

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.290
DRR006520Root Summer glycyrrhizin high producing strain13.070
DRR006521Root Winter glycyrrhizin high producing strain8.050
DRR006522Root Winter glycyrrhizin high producing strain7.702
DRR006523Root Summer glycyrrhizin low producing strain12.954
DRR006524Root Summer glycyrrhizin low producing strain12.987
DRR006525Leaf Summer glycyrrhizin high producing strain8.412
DRR006526Leaf Summer glycyrrhizin high producing strain8.323

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.842
SRR2868004Drought Stress(Tissue:root)22.702
SRR2967015Control (Tissue:root)22.236

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.128
SRR9715740Leave14.911
SRR9715741Leave17.541
SRR9715739Root2.795
SRR9715742Root14.058
SRR9715743Root12.058

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.561
SRR8749028MeJA induced 9h13.951
SRR8749029MeJA induced 9h7.297
SRR8749030Uninduced8.334
SRR8749031Uninduced6.081
SRR8749032Uninduced4.461

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.595
SRR8400027Control-Root21.068

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved