Gene detail information of Glyur000008s00001264.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G18525.10protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases
NRXP_004496667.10PREDICTED: probable inactive serine/threonine-protein kinase lvsG-like [Cicer arietinum]
COGYP_003167824.13.00E-10WD-40 repeat-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]
trEMBLtr|K7N3K0|K7N3K0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G28915.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000088537495101-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000008s00001264.1PF00069.20Pkinase2052852.30E-08
Glyur000008s00001264.1PF02138.13Beach3435733.00E-65
Glyur000008s00001264.1PF00400.27WD40137114060.038
Glyur000008s00001264.1PF00400.27WD40155215887.00E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.284
SRR1783600control9.294
SRR1783602moderate drought stress11.749
SRR1811619moderate drought stress11.599

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.526
DRR006520Root Summer glycyrrhizin high producing strain6.554
DRR006521Root Winter glycyrrhizin high producing strain9.836
DRR006522Root Winter glycyrrhizin high producing strain9.452
DRR006523Root Summer glycyrrhizin low producing strain7.294
DRR006524Root Summer glycyrrhizin low producing strain7.302
DRR006525Leaf Summer glycyrrhizin high producing strain5.348
DRR006526Leaf Summer glycyrrhizin high producing strain5.306

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.318
SRR2868004Drought Stress(Tissue:root)26.433
SRR2967015Control (Tissue:root)26.141

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.585
SRR9715740Leave11.904
SRR9715741Leave17.006
SRR9715739Root3.282
SRR9715742Root16.692
SRR9715743Root13.692

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.234
SRR8749028MeJA induced 9h14.228
SRR8749029MeJA induced 9h6.735
SRR8749030Uninduced11.234
SRR8749031Uninduced9.111
SRR8749032Uninduced7.726

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.524
SRR8400027Control-Root24.989

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved