Gene detail information of Glyur000008s00001274.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G43850.17.00E-89RmlC-like cupins superfamily protein
NRXP_004496677.11.04E-123PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1-like [Cicer arietinum]
COGYP_003268639.16.00E-22acireductone dioxygenase [Haliangium ochraceum DSM 14365]
Swissprottr|D7T737|MTND1_VITVI1.00E-1141,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 {ECO:0000255|HAMAP-Rule:MF_03154}
trEMBLtr|I3SWK2|I3SWK2_MEDTR1.00E-1221,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_03154}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00008144590146504-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08967mtnD, mtnZ, ADI1 EC:1.13.11.53 1.13.11.54 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0019509  L-methionine biosynthetic process from methylthioadenosine

GO:0055114  oxidation-reduction process


molecular_function

GO:0010309  acireductone dioxygenase [iron(II)-requiring] activity

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000008s00001274.2PF03079.9ARD311845.00E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.463
SRR1783600control13.328
SRR1783602moderate drought stress8.139
SRR1811619moderate drought stress7.579

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.312
DRR006520Root Summer glycyrrhizin high producing strain27.058
DRR006521Root Winter glycyrrhizin high producing strain4.258
DRR006522Root Winter glycyrrhizin high producing strain4.382
DRR006523Root Summer glycyrrhizin low producing strain32.162
DRR006524Root Summer glycyrrhizin low producing strain31.451
DRR006525Leaf Summer glycyrrhizin high producing strain230.443
DRR006526Leaf Summer glycyrrhizin high producing strain222.077

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.330
SRR2868004Drought Stress(Tissue:root)11.006
SRR2967015Control (Tissue:root)11.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave220.511
SRR9715740Leave278.421
SRR9715741Leave195.974
SRR9715739Root2.698
SRR9715742Root6.980
SRR9715743Root7.029

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.662
SRR8749028MeJA induced 9h22.059
SRR8749029MeJA induced 9h18.282
SRR8749030Uninduced23.447
SRR8749031Uninduced13.129
SRR8749032Uninduced15.109

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.106
SRR8400027Control-Root7.945

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved