Gene detail information of Glyur000008s00001286.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32020.1 | 8.00E-37 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | KEH43818.1 | 1.98E-87 | acetyltransferase (GNAT) domain protein [Medicago truncatula] |
| COG | YP_004102565.1 | 5.00E-23 | N-acetyltransferase GCN5 [Thermaerobacter marianensis DSM 12885] |
| trEMBL | tr|A0A072VQW9|A0A072VQW9_MEDTR | 7.00E-88 | Acetyltransferase (GNAT) domain protein {ECO:0000313|EMBL:KEH43818.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 228094 | 228627 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001286.1 | PF13302.1 | Acetyltransf_3 | 24 | 162 | 5.70E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.100 |
| SRR1783600 | control | 2.137 |
| SRR1783602 | moderate drought stress | 2.378 |
| SRR1811619 | moderate drought stress | 2.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.072 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.347 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.365 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.457 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.791 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.839 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.606 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.225 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.626 |
| SRR2967015 | Control (Tissue:root) | 14.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.702 |
| SRR9715740 | Leave | 5.845 |
| SRR9715741 | Leave | 5.549 |
| SRR9715739 | Root | 4.021 |
| SRR9715742 | Root | 4.274 |
| SRR9715743 | Root | 3.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.408 |
| SRR8749028 | MeJA induced 9h | 5.960 |
| SRR8749029 | MeJA induced 9h | 9.044 |
| SRR8749030 | Uninduced | 12.458 |
| SRR8749031 | Uninduced | 10.307 |
| SRR8749032 | Uninduced | 14.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.207 |
| SRR8400027 | Control-Root | 1.609 |