Gene detail information of Glyur000008s00001323.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G14880.43.00E-130O-acetylserine (thiol) lyase (OAS-TL) isoform A1
NRXP_004496722.10PREDICTED: cysteine synthase-like [Cicer arietinum]
COGYP_591171.11.00E-128cysteine synthase [Candidatus Koribacter versatilis Ellin345]
Swissprottr|Q43317|CYSK_CITLA0Cysteine synthase
trEMBLtr|A0A072W0S8|A0A072W0S8_MEDTR0Cysteine synthase {ECO:0000256|RuleBase:RU003985}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00008424845428605-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01738cysK EC:2.5.1.47 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270


Gene Ontology

biological_process

GO:0006535  cysteine biosynthetic process from serine


molecular_function

GO:0004124  cysteine synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000008s00001323.1PF00291.20PALP132993.30E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.021
SRR1783600control0.021
SRR1783602moderate drought stress0.022
SRR1811619moderate drought stress0.042

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain1.253
DRR006522Root Winter glycyrrhizin high producing strain1.179
DRR006523Root Summer glycyrrhizin low producing strain0.063
DRR006524Root Summer glycyrrhizin low producing strain0.061
DRR006525Leaf Summer glycyrrhizin high producing strain29.774
DRR006526Leaf Summer glycyrrhizin high producing strain29.395

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.048
SRR2868004Drought Stress(Tissue:root)0.108
SRR2967015Control (Tissue:root)0.042

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave77.351
SRR9715740Leave125.526
SRR9715741Leave211.901
SRR9715739Root0.000
SRR9715742Root0.245
SRR9715743Root0.179

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.006
SRR8749028MeJA induced 9h0.039
SRR8749029MeJA induced 9h0.035
SRR8749030Uninduced0.256
SRR8749031Uninduced0.030
SRR8749032Uninduced0.042

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.012
SRR8400027Control-Root0.163

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved