Gene detail information of Glyur000009s00001373.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G03210.11.00E-126xyloglucan endotransglucosylase/hydrolase 9
NRXP_003540327.10PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 9 [Glycine max]
COGYP_005432194.11.00E-13putative beta-glucanase [Selenomonas ruminantium subsp. lactilytica TAM6421]
Swissprottr|Q8LDW9|XTH9_ARATH4.00E-159Xyloglucan endotransglucosylase/hydrolase protein 9 (Precursor)
trEMBLtr|I1LU96|I1LU96_SOYBN0Xyloglucan endotransglucosylase/hydrolase {ECO:0000256|RuleBase:RU361120}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000091661019501+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH16


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006073  cellular glucan metabolic process


cellular_component

GO:0005618  cell wall

GO:0048046  apoplast


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0016762  xyloglucan:xyloglucosyl transferase activity

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000009s00001373.1PF00722.16Glyco_hydro_16272041.30E-55
Glyur000009s00001373.1PF06955.7XET_C2352874.10E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control82.930
SRR1783600control83.235
SRR1783602moderate drought stress114.742
SRR1811619moderate drought stress113.636

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain205.266
DRR006520Root Summer glycyrrhizin high producing strain200.981
DRR006521Root Winter glycyrrhizin high producing strain0.228
DRR006522Root Winter glycyrrhizin high producing strain0.297
DRR006523Root Summer glycyrrhizin low producing strain30.585
DRR006524Root Summer glycyrrhizin low producing strain30.411
DRR006525Leaf Summer glycyrrhizin high producing strain27.779
DRR006526Leaf Summer glycyrrhizin high producing strain27.137

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.051
SRR2868004Drought Stress(Tissue:root)25.273
SRR2967015Control (Tissue:root)31.655

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.589
SRR9715740Leave7.821
SRR9715741Leave13.656
SRR9715739Root72.496
SRR9715742Root24.900
SRR9715743Root29.343

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h188.435
SRR8749028MeJA induced 9h178.857
SRR8749029MeJA induced 9h134.539
SRR8749030Uninduced9.812
SRR8749031Uninduced0.591
SRR8749032Uninduced5.154

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.071
SRR8400027Control-Root95.959

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved