Gene detail information of Glyur000009s00001380.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54470.15.00E-26B-box type zinc finger family protein
NRXP_003597068.16.42E-66Zinc finger protein CONSTANS-like protein [Medicago truncatula]
Swissprottr|Q9LJB7|BBX32_ARATH6.00E-10B-box zinc finger protein 32 {ECO:0000303|PubMed:19920209}
trEMBLtr|G7IRL0|G7IRL0_MEDTR2.00E-66B-box type zinc finger protein {ECO:0000313|EMBL:AES67319.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000093986941263+


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

cellular_component

GO:0005622  intracellular


molecular_function

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000009s00001380.1PF00643.19zf-B_box2433.30E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.849
SRR1783600control8.971
SRR1783602moderate drought stress36.973
SRR1811619moderate drought stress36.553

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.607
DRR006520Root Summer glycyrrhizin high producing strain13.394
DRR006521Root Winter glycyrrhizin high producing strain360.128
DRR006522Root Winter glycyrrhizin high producing strain349.839
DRR006523Root Summer glycyrrhizin low producing strain21.328
DRR006524Root Summer glycyrrhizin low producing strain21.227
DRR006525Leaf Summer glycyrrhizin high producing strain26.624
DRR006526Leaf Summer glycyrrhizin high producing strain26.310

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.187
SRR2868004Drought Stress(Tissue:root)36.178
SRR2967015Control (Tissue:root)34.097

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave181.259
SRR9715740Leave140.391
SRR9715741Leave176.610
SRR9715739Root65.958
SRR9715742Root90.816
SRR9715743Root89.289

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h71.698
SRR8749028MeJA induced 9h91.341
SRR8749029MeJA induced 9h96.308
SRR8749030Uninduced55.470
SRR8749031Uninduced47.282
SRR8749032Uninduced102.571

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.795
SRR8400027Control-Root17.451

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved