Gene detail information of Glyur000009s00001412.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G20810.10galacturonosyltransferase 10
NRXP_003593733.10Glycosyl transferase protein A [Medicago truncatula]
COGYP_007080337.13.00E-06LPS:glycosyltransferase [Pleurocapsa sp. PCC 7327]
Swissprottr|Q9SKT6|GAUTA_ARATH0Probable galacturonosyltransferase 10
trEMBLtr|G7IKA2|G7IKA2_MEDTR0CAZy family GT8 glycosyltransferase {ECO:0000313|EMBL:AES63984.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00009228229231782+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13648GAUT EC:2.4.1.43 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047262  polygalacturonate 4-alpha-galacturonosyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000009s00001412.1PF01501.15Glyco_transf_82385074.20E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.448
SRR1783600control12.204
SRR1783602moderate drought stress9.580
SRR1811619moderate drought stress9.782

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.378
DRR006520Root Summer glycyrrhizin high producing strain10.324
DRR006521Root Winter glycyrrhizin high producing strain13.322
DRR006522Root Winter glycyrrhizin high producing strain13.124
DRR006523Root Summer glycyrrhizin low producing strain8.518
DRR006524Root Summer glycyrrhizin low producing strain8.503
DRR006525Leaf Summer glycyrrhizin high producing strain7.031
DRR006526Leaf Summer glycyrrhizin high producing strain7.329

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.398
SRR2868004Drought Stress(Tissue:root)15.920
SRR2967015Control (Tissue:root)14.391

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.542
SRR9715740Leave10.483
SRR9715741Leave8.088
SRR9715739Root7.506
SRR9715742Root9.498
SRR9715743Root10.328

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.925
SRR8749028MeJA induced 9h11.507
SRR8749029MeJA induced 9h6.708
SRR8749030Uninduced6.080
SRR8749031Uninduced3.323
SRR8749032Uninduced3.556

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.540
SRR8400027Control-Root21.350

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved