Gene detail information of Glyur000009s00001415.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03520.1 | 0 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_007132639.1 | 0 | hypothetical protein PHAVU_011G112200g [Phaseolus vulgaris] |
| trEMBL | tr|V7AIF6|V7AIF6_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW04633.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00009 | 242587 | 248994 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT14 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000009s00001415.1 | PF02485.16 | Branch | 89 | 348 | 1.10E-69 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.510 |
| SRR1783600 | control | 7.640 |
| SRR1783602 | moderate drought stress | 9.334 |
| SRR1811619 | moderate drought stress | 9.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.127 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.877 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.077 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.983 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.885 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.024 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.504 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.412 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.512 |
| SRR2967015 | Control (Tissue:root) | 14.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 16.127 |
| SRR9715740 | Leave | 12.634 |
| SRR9715741 | Leave | 13.408 |
| SRR9715739 | Root | 3.990 |
| SRR9715742 | Root | 7.198 |
| SRR9715743 | Root | 6.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.062 |
| SRR8749028 | MeJA induced 9h | 3.944 |
| SRR8749029 | MeJA induced 9h | 1.849 |
| SRR8749030 | Uninduced | 2.830 |
| SRR8749031 | Uninduced | 1.630 |
| SRR8749032 | Uninduced | 2.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.681 |
| SRR8400027 | Control-Root | 10.528 |