Gene detail information of Glyur000009s00001422.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G03390.10STRUBBELIG-receptor family 3
NRXP_004487313.10PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Cicer arietinum]
COGYP_001192956.13.00E-20two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q6R2K3|SRF3_ARATH0Protein STRUBBELIG-RECEPTOR FAMILY 3 (Precursor)
trEMBLtr|I1LUE2|I1LUE2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G32880.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00009282424289949-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000009s00001422.3PF08263.7LRRNT_238771.70E-05
Glyur000009s00001422.3PF00560.28LRR_11271480.42
Glyur000009s00001422.3PF12799.2LRR_41742146.20E-07
Glyur000009s00001422.3PF07714.12Pkinase_Tyr4907672.70E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.237
SRR1783600control26.689
SRR1783602moderate drought stress36.458
SRR1811619moderate drought stress35.657

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.237
DRR006520Root Summer glycyrrhizin high producing strain18.952
DRR006521Root Winter glycyrrhizin high producing strain78.485
DRR006522Root Winter glycyrrhizin high producing strain76.109
DRR006523Root Summer glycyrrhizin low producing strain21.590
DRR006524Root Summer glycyrrhizin low producing strain21.173
DRR006525Leaf Summer glycyrrhizin high producing strain6.768
DRR006526Leaf Summer glycyrrhizin high producing strain6.762

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.905
SRR2868004Drought Stress(Tissue:root)22.894
SRR2967015Control (Tissue:root)35.881

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.440
SRR9715740Leave1.930
SRR9715741Leave3.146
SRR9715739Root5.890
SRR9715742Root16.840
SRR9715743Root14.804

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.487
SRR8749028MeJA induced 9h22.605
SRR8749029MeJA induced 9h12.729
SRR8749030Uninduced6.969
SRR8749031Uninduced3.097
SRR8749032Uninduced5.788

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.872
SRR8400027Control-Root33.146

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved