Gene detail information of Glyur000009s00001445.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G20880.11.00E-38Integrase-type DNA-binding superfamily protein
NRXP_007149866.13.47E-133hypothetical protein PHAVU_005G105200g [Phaseolus vulgaris]
Swissprottr|Q9SKT1|ERF53_ARATH2.00E-54Ethylene-responsive transcription factor ERF053
trEMBLtr|V7BXT7|V7BXT7_PHAVU1.00E-133Uncharacterized protein {ECO:0000313|EMBL:ESW21860.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00009388308389768+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000009s00001445.1PF00847.15AP22362861.70E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.430
SRR1783600control0.458
SRR1783602moderate drought stress0.581
SRR1811619moderate drought stress0.541

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.447
DRR006520Root Summer glycyrrhizin high producing strain24.204
DRR006521Root Winter glycyrrhizin high producing strain0.426
DRR006522Root Winter glycyrrhizin high producing strain0.291
DRR006523Root Summer glycyrrhizin low producing strain27.772
DRR006524Root Summer glycyrrhizin low producing strain27.403
DRR006525Leaf Summer glycyrrhizin high producing strain7.120
DRR006526Leaf Summer glycyrrhizin high producing strain7.278

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.382
SRR2868004Drought Stress(Tissue:root)4.453
SRR2967015Control (Tissue:root)18.819

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.468
SRR9715740Leave4.946
SRR9715741Leave8.911
SRR9715739Root0.977
SRR9715742Root8.674
SRR9715743Root6.212

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.124
SRR8749028MeJA induced 9h13.066
SRR8749029MeJA induced 9h1.456
SRR8749030Uninduced3.365
SRR8749031Uninduced2.207
SRR8749032Uninduced1.877

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.287
SRR8400027Control-Root1.060

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved