Gene detail information of Glyur000009s00001472.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G53050.10Protein kinase superfamily protein
NRXP_003539536.10PREDICTED: probable serine/threonine-protein kinase At1g09600-like [Glycine max]
COGYP_003371239.16.00E-22serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|F4I114|Y1960_ARATH0Probable serine/threonine-protein kinase At1g09600
trEMBLtr|I1LUH2|I1LUH2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G33230.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00009535067541104+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000009s00001472.1PF00069.20Pkinase1394223.80E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.691
SRR1783600control6.832
SRR1783602moderate drought stress6.136
SRR1811619moderate drought stress6.105

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.877
DRR006520Root Summer glycyrrhizin high producing strain8.680
DRR006521Root Winter glycyrrhizin high producing strain10.100
DRR006522Root Winter glycyrrhizin high producing strain9.824
DRR006523Root Summer glycyrrhizin low producing strain18.367
DRR006524Root Summer glycyrrhizin low producing strain18.435
DRR006525Leaf Summer glycyrrhizin high producing strain8.609
DRR006526Leaf Summer glycyrrhizin high producing strain8.658

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.555
SRR2868004Drought Stress(Tissue:root)21.675
SRR2967015Control (Tissue:root)19.812

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.124
SRR9715740Leave14.922
SRR9715741Leave23.377
SRR9715739Root2.090
SRR9715742Root9.344
SRR9715743Root9.012

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.788
SRR8749028MeJA induced 9h43.692
SRR8749029MeJA induced 9h15.830
SRR8749030Uninduced28.999
SRR8749031Uninduced33.179
SRR8749032Uninduced14.519

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.001
SRR8400027Control-Root13.582

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved