Gene detail information of Glyur000009s00001473.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G04960.15.00E-179Concanavalin A-like lectin protein kinase family protein
NRKEH39141.10lectin receptor kinase [Medicago truncatula]
COGYP_004571825.15.00E-19serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|O49445|LRK72_ARATH0Probable L-type lectin-domain containing receptor kinase VII.2 (Precursor)
trEMBLtr|A0A072VC03|A0A072VC03_MEDTR0Lectin receptor kinase {ECO:0000313|EMBL:KEH39141.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00009541954548182-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000009s00001473.1PF00139.14Lectin_legB271371.30E-21
Glyur000009s00001473.1PF00139.14Lectin_legB1422172.70E-18
Glyur000009s00001473.1PF00069.20Pkinase3105773.20E-45
Glyur000009s00001473.1PF00139.14Lectin_legB6859217.00E-66
Glyur000009s00001473.1PF00069.20Pkinase101212753.30E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.928
SRR1783600control0.932
SRR1783602moderate drought stress2.780
SRR1811619moderate drought stress2.765

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.993
DRR006520Root Summer glycyrrhizin high producing strain4.811
DRR006521Root Winter glycyrrhizin high producing strain2.013
DRR006522Root Winter glycyrrhizin high producing strain2.051
DRR006523Root Summer glycyrrhizin low producing strain10.252
DRR006524Root Summer glycyrrhizin low producing strain10.030
DRR006525Leaf Summer glycyrrhizin high producing strain6.563
DRR006526Leaf Summer glycyrrhizin high producing strain6.386

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.993
SRR2868004Drought Stress(Tissue:root)5.708
SRR2967015Control (Tissue:root)5.671

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.218
SRR9715740Leave9.610
SRR9715741Leave6.863
SRR9715739Root0.701
SRR9715742Root9.103
SRR9715743Root6.564

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.480
SRR8749028MeJA induced 9h0.844
SRR8749029MeJA induced 9h0.376
SRR8749030Uninduced2.491
SRR8749031Uninduced1.397
SRR8749032Uninduced0.736

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.628
SRR8400027Control-Root7.267

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved