Gene detail information of Glyur000010s00000889.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55260.1 | 1.00E-05 | protein phosphatase X 2 |
| Swissprot | tr|P48528|PPX2_ARATH | 2.00E-06 | Serine/threonine-protein phosphatase PP-X isozyme 2 |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 44072 | 46971 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K15423 | PPP4C | EC:3.1.3.16 | Glucagon signaling pathway | map04922 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.937 |
| SRR1783600 | control | 0.885 |
| SRR1783602 | moderate drought stress | 2.197 |
| SRR1811619 | moderate drought stress | 2.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.181 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.923 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.964 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.462 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.110 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.072 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.050 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.246 |
| SRR2967015 | Control (Tissue:root) | 10.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.617 |
| SRR9715740 | Leave | 0.071 |
| SRR9715741 | Leave | 0.442 |
| SRR9715739 | Root | 0.120 |
| SRR9715742 | Root | 0.305 |
| SRR9715743 | Root | 1.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.570 |
| SRR8749028 | MeJA induced 9h | 6.047 |
| SRR8749029 | MeJA induced 9h | 1.991 |
| SRR8749030 | Uninduced | 2.355 |
| SRR8749031 | Uninduced | 3.043 |
| SRR8749032 | Uninduced | 1.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.544 |
| SRR8400027 | Control-Root | 5.105 |