Gene detail information of Glyur000010s00000901.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G63280.1 | 2.00E-52 | C2H2-like zinc finger protein |
| NR | XP_004515836.1 | 6.25E-113 | PREDICTED: uncharacterized protein LOC101493304 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1LW13|I1LW13_SOYBN | 1.00E-111 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G02180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 128891 | 132052 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.852 |
| SRR1783600 | control | 1.800 |
| SRR1783602 | moderate drought stress | 2.692 |
| SRR1811619 | moderate drought stress | 2.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.158 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.105 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.803 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.360 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.793 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.770 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.132 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.821 |
| SRR2967015 | Control (Tissue:root) | 7.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.954 |
| SRR9715740 | Leave | 3.714 |
| SRR9715741 | Leave | 3.706 |
| SRR9715739 | Root | 0.650 |
| SRR9715742 | Root | 2.819 |
| SRR9715743 | Root | 1.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.882 |
| SRR8749028 | MeJA induced 9h | 5.418 |
| SRR8749029 | MeJA induced 9h | 3.724 |
| SRR8749030 | Uninduced | 3.389 |
| SRR8749031 | Uninduced | 1.650 |
| SRR8749032 | Uninduced | 1.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.961 |
| SRR8400027 | Control-Root | 7.964 |