Gene detail information of Glyur000010s00000909.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63310.11.00E-65nucleoside diphosphate kinase 2
NRXP_003525659.14.69E-123PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Glycine max]
COGNP_681058.19.00E-59nucleoside diphosphate kinase [Thermosynechococcus elongatus BP-1]
Swissprottr|P47923|NDK2_PEA7.00E-112Nucleoside diphosphate kinase 2 low molecular weight (Precursor)
trEMBLtr|I1K081|I1K081_SOYBN2.00E-123Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00010151167153831-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00940ndk, NME EC:2.7.4.6 Purine metabolism map00230
Pyrimidine metabolismmap00240
MAPK signaling pathway - plantmap04016


Gene Ontology

biological_process

GO:0006165  nucleoside diphosphate phosphorylation

GO:0006183  GTP biosynthetic process

GO:0006228  UTP biosynthetic process

GO:0006241  CTP biosynthetic process


molecular_function

GO:0004550  nucleoside diphosphate kinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000010s00000909.1PF00334.14NDK962192.00E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.648
SRR1783600control36.884
SRR1783602moderate drought stress25.016
SRR1811619moderate drought stress24.618

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.855
DRR006520Root Summer glycyrrhizin high producing strain25.706
DRR006521Root Winter glycyrrhizin high producing strain19.058
DRR006522Root Winter glycyrrhizin high producing strain18.698
DRR006523Root Summer glycyrrhizin low producing strain19.395
DRR006524Root Summer glycyrrhizin low producing strain20.171
DRR006525Leaf Summer glycyrrhizin high producing strain70.170
DRR006526Leaf Summer glycyrrhizin high producing strain69.263

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.320
SRR2868004Drought Stress(Tissue:root)21.133
SRR2967015Control (Tissue:root)15.505

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.367
SRR9715740Leave33.234
SRR9715741Leave25.908
SRR9715739Root7.380
SRR9715742Root9.637
SRR9715743Root10.093

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.194
SRR8749028MeJA induced 9h10.285
SRR8749029MeJA induced 9h14.952
SRR8749030Uninduced14.809
SRR8749031Uninduced10.722
SRR8749032Uninduced14.017

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.130
SRR8400027Control-Root22.728

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved