Gene detail information of Glyur000010s00000910.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66350.1 | 7.00E-71 | RGA-like 1 |
| NR | XP_003608883.1 | 0 | GRAS family transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9C8Y3|RGL1_ARATH | 8.00E-81 | DELLA protein RGL1 |
| trEMBL | tr|G7JMM0|G7JMM0_MEDTR | 0 | GRAS family transcription factor {ECO:0000313|EMBL:AES91080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 156718 | 158310 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000910.1 | PF03514.9 | GRAS | 157 | 529 | 4.40E-112 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.092 |
| SRR1783600 | control | 0.081 |
| SRR1783602 | moderate drought stress | 0.184 |
| SRR1811619 | moderate drought stress | 0.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.680 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.674 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.330 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.252 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.069 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.069 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.350 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.276 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.264 |
| SRR2967015 | Control (Tissue:root) | 1.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.175 |
| SRR9715740 | Leave | 0.200 |
| SRR9715741 | Leave | 0.455 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.378 |
| SRR9715743 | Root | 0.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.580 |
| SRR8749028 | MeJA induced 9h | 0.773 |
| SRR8749029 | MeJA induced 9h | 0.499 |
| SRR8749030 | Uninduced | 0.753 |
| SRR8749031 | Uninduced | 0.568 |
| SRR8749032 | Uninduced | 0.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.439 |
| SRR8400027 | Control-Root | 0.965 |