Gene detail information of Glyur000010s00000913.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G03860.20malate synthase
NRXP_003637218.10Malate synthase [Medicago truncatula]
COGYP_634565.10malate synthase [Myxococcus xanthus DK 1622]
Swissprottr|P45458|MASY_SOYBN0Malate synthase, glyoxysomal (Fragment)
trEMBLtr|G7ZYR8|G7ZYR8_MEDTR0Malate synthase {ECO:0000256|RuleBase:RU000555}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00010189484192793+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01638aceB, glcB EC:2.3.3.9 Carbon metabolism map01200
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630


Gene Ontology

biological_process

GO:0006097  glyoxylate cycle


molecular_function

GO:0003824  catalytic activity

GO:0004474  malate synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000010s00000913.1PF01274.17Malate_synthase305606.60E-219


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.502
SRR1783600control16.594
SRR1783602moderate drought stress23.944
SRR1811619moderate drought stress23.606

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.397
DRR006520Root Summer glycyrrhizin high producing strain18.297
DRR006521Root Winter glycyrrhizin high producing strain49.286
DRR006522Root Winter glycyrrhizin high producing strain47.732
DRR006523Root Summer glycyrrhizin low producing strain24.470
DRR006524Root Summer glycyrrhizin low producing strain24.653
DRR006525Leaf Summer glycyrrhizin high producing strain2.143
DRR006526Leaf Summer glycyrrhizin high producing strain2.143

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.261
SRR2868004Drought Stress(Tissue:root)4.785
SRR2967015Control (Tissue:root)9.118

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.440
SRR9715740Leave19.044
SRR9715741Leave7.226
SRR9715739Root23.524
SRR9715742Root7.079
SRR9715743Root9.769

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h38.463
SRR8749028MeJA induced 9h150.121
SRR8749029MeJA induced 9h95.906
SRR8749030Uninduced236.640
SRR8749031Uninduced181.550
SRR8749032Uninduced105.445

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.962
SRR8400027Control-Root5.611

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved