Gene detail information of Glyur000010s00000921.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24830.10arginosuccinate synthase family
NRXP_003613940.10Argininosuccinate synthase [Medicago truncatula]
COGYP_004173878.17.00E-177argininosuccinate synthase [Anaerolinea thermophila UNI-1]
Swissprottr|Q9SZX3|ASSY_ARATH0Argininosuccinate synthase, chloroplastic (Precursor)
trEMBLtr|G7JWM6|G7JWM6_MEDTR0Argininosuccinate synthase {ECO:0000313|EMBL:AES96898.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00010239631243574+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01940argG, ASS1 EC:6.3.4.5 Biosynthesis of amino acids map01230
Alanine, aspartate and glutamate metabolismmap00250
Arginine biosynthesismap00220
Fluid shear stress and atherosclerosismap05418


Gene Ontology

biological_process

GO:0006526  arginine biosynthetic process


molecular_function

GO:0004055  argininosuccinate synthase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000010s00000921.1PF00764.14Arginosuc_synth851806.00E-34
Glyur000010s00000921.1PF00764.14Arginosuc_synth2214893.00E-101


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.910
SRR1783600control32.139
SRR1783602moderate drought stress30.682
SRR1811619moderate drought stress30.436

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain52.540
DRR006520Root Summer glycyrrhizin high producing strain52.123
DRR006521Root Winter glycyrrhizin high producing strain15.700
DRR006522Root Winter glycyrrhizin high producing strain15.282
DRR006523Root Summer glycyrrhizin low producing strain40.870
DRR006524Root Summer glycyrrhizin low producing strain40.933
DRR006525Leaf Summer glycyrrhizin high producing strain22.084
DRR006526Leaf Summer glycyrrhizin high producing strain21.619

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)65.208
SRR2868004Drought Stress(Tissue:root)51.969
SRR2967015Control (Tissue:root)49.648

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.288
SRR9715740Leave26.465
SRR9715741Leave24.125
SRR9715739Root86.504
SRR9715742Root69.764
SRR9715743Root75.859

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h39.698
SRR8749028MeJA induced 9h38.131
SRR8749029MeJA induced 9h26.472
SRR8749030Uninduced6.077
SRR8749031Uninduced2.579
SRR8749032Uninduced5.339

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root71.057
SRR8400027Control-Root73.706

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved