Gene detail information of Glyur000010s00000927.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G40870.10uridine kinase/uracil phosphoribosyltransferase 1
NRXP_003550868.10PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine max]
COGNP_242141.18.00E-56uridine kinase [Bacillus halodurans C-125]
Swissprottr|Q9LK34|UKL2_ARATH0Putative uracil phosphoribosyltransferase (Precursor)
trEMBLtr|I1MUP0|I1MUP0_SOYBN0Uridine kinase {ECO:0000256|RuleBase:RU003825}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00010271402276903+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00876udk, UCK EC:2.7.1.48 Pyrimidine metabolism map00240
Drug metabolism - other enzymesmap00983


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0044206  UMP salvage


molecular_function

GO:0004849  uridine kinase activity

GO:0005524  ATP binding

GO:0016301  kinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000010s00000927.1PF00485.13PRK422212.30E-40
Glyur000010s00000927.1PF14681.1UPRTase2514513.70E-70


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.700
SRR1783600control4.728
SRR1783602moderate drought stress4.490
SRR1811619moderate drought stress4.377

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.045
DRR006520Root Summer glycyrrhizin high producing strain6.877
DRR006521Root Winter glycyrrhizin high producing strain8.469
DRR006522Root Winter glycyrrhizin high producing strain8.066
DRR006523Root Summer glycyrrhizin low producing strain11.137
DRR006524Root Summer glycyrrhizin low producing strain10.562
DRR006525Leaf Summer glycyrrhizin high producing strain3.366
DRR006526Leaf Summer glycyrrhizin high producing strain3.339

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.967
SRR2868004Drought Stress(Tissue:root)4.987
SRR2967015Control (Tissue:root)5.102

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.465
SRR9715740Leave1.554
SRR9715741Leave1.791
SRR9715739Root0.835
SRR9715742Root5.946
SRR9715743Root4.737

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.176
SRR8749028MeJA induced 9h7.322
SRR8749029MeJA induced 9h6.196
SRR8749030Uninduced4.931
SRR8749031Uninduced10.281
SRR8749032Uninduced6.693

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.354
SRR8400027Control-Root9.851

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved