Gene detail information of Glyur000010s00000939.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01490.1 | 1.00E-11 | Protein kinase superfamily protein |
| NR | XP_006360755.1 | 2.51E-12 | PREDICTED: serine/threonine-protein kinase HT1-like isoform X4 [Solanum tuberosum] |
| trEMBL | tr|M1D5J7|M1D5J7_SOLTU | 9.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400082064} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 345573 | 346631 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:2.1.4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000939.1 | PF07714.12 | Pkinase_Tyr | 15 | 38 | 0.00014 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.666 |
| SRR1783600 | control | 0.427 |
| SRR1783602 | moderate drought stress | 1.107 |
| SRR1811619 | moderate drought stress | 1.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.111 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.326 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.936 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.680 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.285 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.424 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.905 |
| SRR2967015 | Control (Tissue:root) | 1.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.042 |
| SRR9715740 | Leave | 0.735 |
| SRR9715741 | Leave | 0.227 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.260 |
| SRR8749028 | MeJA induced 9h | 3.447 |
| SRR8749029 | MeJA induced 9h | 2.164 |
| SRR8749030 | Uninduced | 3.880 |
| SRR8749031 | Uninduced | 5.381 |
| SRR8749032 | Uninduced | 6.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.364 |
| SRR8400027 | Control-Root | 0.336 |