Gene detail information of Glyur000010s00000976.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30500.22.00E-43nuclear factor Y, subunit A7
NRACU19519.19.63E-104unknown [Glycine max]
Swissprottr|Q84JP1|NFYA7_ARATH5.00E-63Nuclear transcription factor Y subunit A-7
trEMBLtr|C6TCG7|C6TCG7_SOYBN4.00E-104Putative uncharacterized protein {ECO:0000313|EMBL:ACU19519.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00010528450530791+


Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0016602  CCAAT-binding factor complex


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000010s00000976.1PF02045.10CBFB_NFYA881443.40E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.283
SRR1783600control18.838
SRR1783602moderate drought stress26.556
SRR1811619moderate drought stress26.314

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.505
DRR006520Root Summer glycyrrhizin high producing strain18.818
DRR006521Root Winter glycyrrhizin high producing strain27.649
DRR006522Root Winter glycyrrhizin high producing strain29.131
DRR006523Root Summer glycyrrhizin low producing strain26.039
DRR006524Root Summer glycyrrhizin low producing strain25.981
DRR006525Leaf Summer glycyrrhizin high producing strain10.957
DRR006526Leaf Summer glycyrrhizin high producing strain10.706

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.687
SRR2868004Drought Stress(Tissue:root)13.605
SRR2967015Control (Tissue:root)11.272

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.511
SRR9715740Leave38.724
SRR9715741Leave26.882
SRR9715739Root4.673
SRR9715742Root8.676
SRR9715743Root7.701

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.523
SRR8749028MeJA induced 9h14.048
SRR8749029MeJA induced 9h19.629
SRR8749030Uninduced13.940
SRR8749031Uninduced9.517
SRR8749032Uninduced9.192

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.584
SRR8400027Control-Root14.894

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved