Gene detail information of Glyur000010s00000978.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34710.1 | 0 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
| NR | XP_004504217.1 | 0 | PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Cicer arietinum] |
| Swissprot | tr|Q6AST1|HOX32_ORYSJ | 0 | Homeobox-leucine zipper protein HOX32 |
| trEMBL | tr|I1KSN0|I1KSN0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G13110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 545781 | 551928 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000978.1 | PF00046.24 | Homeobox | 20 | 78 | 1.50E-16 |
| Glyur000010s00000978.1 | PF01852.14 | START | 169 | 376 | 7.60E-49 |
| Glyur000010s00000978.1 | PF08670.6 | MEKHLA | 692 | 841 | 3.90E-59 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.016 |
| SRR1783600 | control | 2.088 |
| SRR1783602 | moderate drought stress | 2.849 |
| SRR1811619 | moderate drought stress | 2.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.316 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.089 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.943 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.683 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.083 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.802 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.096 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.975 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.287 |
| SRR2967015 | Control (Tissue:root) | 16.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.243 |
| SRR9715740 | Leave | 0.611 |
| SRR9715741 | Leave | 0.476 |
| SRR9715739 | Root | 1.026 |
| SRR9715742 | Root | 2.458 |
| SRR9715743 | Root | 2.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.646 |
| SRR8749028 | MeJA induced 9h | 27.054 |
| SRR8749029 | MeJA induced 9h | 31.337 |
| SRR8749030 | Uninduced | 2.249 |
| SRR8749031 | Uninduced | 2.227 |
| SRR8749032 | Uninduced | 5.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.038 |
| SRR8400027 | Control-Root | 13.493 |