Gene detail information of Glyur000010s00000981.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G56460.11.00E-152Protein kinase superfamily protein
NRAET04401.20receptor Serine/Threonine kinase [Medicago truncatula]
COGYP_008151634.12.00E-20hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q9FM85|Y5564_ARATH0Probable receptor-like protein kinase At5g56460
trEMBLtr|G7L844|G7L844_MEDTR0Receptor Serine/Threonine kinase {ECO:0000313|EMBL:AET04401.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00010576931585104+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000010s00000981.1PF00069.20Pkinase753422.50E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.262
SRR1783600control3.370
SRR1783602moderate drought stress3.718
SRR1811619moderate drought stress3.858

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.341
DRR006520Root Summer glycyrrhizin high producing strain9.791
DRR006521Root Winter glycyrrhizin high producing strain0.666
DRR006522Root Winter glycyrrhizin high producing strain0.651
DRR006523Root Summer glycyrrhizin low producing strain7.412
DRR006524Root Summer glycyrrhizin low producing strain7.325
DRR006525Leaf Summer glycyrrhizin high producing strain2.671
DRR006526Leaf Summer glycyrrhizin high producing strain2.658

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.128
SRR2868004Drought Stress(Tissue:root)39.425
SRR2967015Control (Tissue:root)33.600

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.066
SRR9715740Leave4.337
SRR9715741Leave2.735
SRR9715739Root2.697
SRR9715742Root10.182
SRR9715743Root10.667

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.249
SRR8749028MeJA induced 9h21.646
SRR8749029MeJA induced 9h12.066
SRR8749030Uninduced4.233
SRR8749031Uninduced2.672
SRR8749032Uninduced2.883

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.755
SRR8400027Control-Root13.573

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved